CDS

Accession Number TCMCG056C31458
gbkey CDS
Protein Id XP_031404236.1
Location complement(join(26478975..26479043,26479135..26479303,26479414..26479517,26479612..26479701,26479797..26479865,26480192..26480325,26480426..26480516,26480592..26480672,26481897..26482022,26482125..26482281,26482387..26482481,26482602..26482661,26482827..26482907,26483578..26483772,26483891..26485009))
Gene LOC116213437
GeneID 116213437
Organism Punica granatum

Protein

Length 879aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA580467
db_source XM_031548376.1
Definition DNA topoisomerase 1 alpha-like isoform X2 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category L
Description dna topoisomerase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K03163        [VIEW IN KEGG]
EC 5.99.1.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003917        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0031298        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCGACGATTTCGATGATGAGGATGGTCCAATGATTTTCAAGAGGCCCGGCTCATCAACTAAGCAAAATGAATTGAAGGCTGAATTGAAGAAGCCATCTTCTCAGAGGCCTGATGGACAGTCAGGGAGACATAATTCGAATGGTCAGAGCTCCAGTTCTCATAAAGGTAATGTTCTGCCATCAGCAAAGCCAACCTCCATGAAACCACCGGCAGGAAACTCCACAAGATCGCCTTTAATGAGCCCAAAAGCATCAACTTCATCTGCAAAGGGGTCTCCTATGATGTCAAAAAAACTATCAACATCATTAGATTCTCAGTCCAGACAATCATCTAGACAGAGCACACCTACCAGTGTTAAAGAGGAATCCGACAATGATTCTGAAGATAAAAAACCACTTAGTTTTAGGATACAAGGTAACTCCAGTATCAGCAGCAAAGGTCAAAGTTTGGCCGGTTTGTCTCAGCCACCAAAGAAAATTGCTGGCAAAGATTCTGCCGATAGTTCTGATGATGAAAAACCTATAGCAGCGAGAATGTCCCAGAAGTCCAACGTTGGGACATCGGTTAGTAAGCCTCATGCTTCTGGTGAAAAGAAGTCCGTGCCTTCAAAAACACAGCAAAATGGGTTTGCCTCAAGAGAAGATTTGCGGAAATCTCCAATTTTGACCAACAAAAGACCACTTGAGAAGACCAGTGCCTCTGATCAGTCATTACTTAAAAAGCCAAAAGTTTCCGATGCATCCTCTGCATTAAAAGCTAAACAATCTGTTAAAGCAGAGTCTGATGATGACGATGATGACCACACTCCAATTGCCCAGAGAATTAAGAAGCCCGCCACGGCTGCATCTGGGAATAAGTCGTCGTCCTCTGCGAAGGAAAAGATAAAACAAGTTGTTTCAACAAAGTTTAAGAAGACTACCAAACAGTCTAAGAAAGTAATGAAGACGTCAAAATACTCTAAATCGACCAGGGTACCACCTGGTTCTGGTGATGGACAGAAAAAGTGGACTACTTTGGAACACAATGGTGTCATTTTTCCACCTCCATACAAGCCCCATGGTGTGAAGATGCTTTATAAAGGGAAGCCTGTTGACTTGGCCCCCGAACAAGAGGAAGTGGCGACAATGTTTGCGGTGATGAAAGATACGGACTATATGCAGAAAGAAAAGTTCAGGGAGAATTTCTGGAATGATTGGAAAAAAATTCTTGGGAGTAAACATCTAATTCAAAAGTTGGAGTATTGTGATTTCACTCCAATATATGATTGGTATCAACAGGAGAAGGAGAAGAAGAAACATATGAGCAAAGAAGAAAAGAATGCTCTTAAAGAAGAGAAATTAAAGCAAGAGGAGAAGTATATGTGGGCCATTGTCGATGGTGTCAAAGAGAAGGTTGGGAACTTCAGAGTTGAGCCACCTGGGTTATTCCGTGGGCGCGGAGAGCATCCAAAGATGGGAAAGCTAAAACGGCGTATTCGCCCAAGGGATATTACAATTAATATTGGAAAGGGTGTTCCAGTTCCGGAATGTCCTATCCCTGGTGAAAAATGGAAAGAAGTAAGACATGACAACACTGTCACGTGGTTGGCCTTTTGGAATGATCCTATAAATCAGAGGGAGTTCAAATATGTGTTTCTTGCTGCAAGCAGCTCCTTGAAGGGCCAAAGTGATAAGGAGAAATATGAGAAAGCGAGGATGTTGAAGGATCACATACACAAAATAAGGACAGCTTATACAAAGAATTTCACGAGCAAAGATGCTTCGAAGCGGCAAATAGCAGTTGCTACTTATCTGATAGATAAGCTGGCTCTGAGGGCTGGAAATGAGAAGGATGATGATGAGGCAGAAACAGTGGGTTGCTGCACATTGAAAGTTGAAAATGTGAAAGCAGTTAGCCCAAACTCATTGGAGTTCAACTTCCTCGGTAAAGATTCCATCAGATATGAAAATACAGTTGAGGTTGAGCTCCCTGTGTACAAGGCAATTCTGCAGTTTCAAGCAGGGAAGAAGCCTGGTGACCCACTTTTTGATGAGCTAGATACCAGTAAACTGAATGCTCATTTGAAGGAATTGATGCCTGGCCTTACAGCGAAAGTCTTCCGTACCTATAATGCTTCTATTACATTGGATGACATGTTGAATCGGGAGACAAAAGAAGGAGATGTTGCAGAGAAAGTTGGAGTATATAATCGTGCAAACAAAGAGGTCGCCATCATTTGCAATCACCAGCGGAGCATTTCAAAATCCCATGCAGCACAAATGGAGAAGTTGACTGAGAAAATCAACGAATTAAAGGACAATCTTAAAGAGCTGAAAGTAGACTTGGAACGGGCACGCAAAGGAAAACCTCCATTGAAAGATGCCGAAGGAAAGCGGAAGAAGAACTTGAGCCCTGAATCAATACAGAAGAAGATAACTCAAATTGAAGCGAAGATAGAGAAAATGGAACGGGATAAGGACACTAAAGAGGATCTGAAAACTGTCGCCTTGGGCACTTCGAAGATCAATTATCTCGACCCAAGAATCACCGTCGCGTGGTGTAAGCGCCATGAAGTCCCAATCGAAAAGATGTTCAACAAGTCTCTGTTGGCGAAGTTCGCCTGGGCGATGGACGTGGAGCCCAACTTCAGATTTTAA
Protein:  
MSDDFDDEDGPMIFKRPGSSTKQNELKAELKKPSSQRPDGQSGRHNSNGQSSSSHKGNVLPSAKPTSMKPPAGNSTRSPLMSPKASTSSAKGSPMMSKKLSTSLDSQSRQSSRQSTPTSVKEESDNDSEDKKPLSFRIQGNSSISSKGQSLAGLSQPPKKIAGKDSADSSDDEKPIAARMSQKSNVGTSVSKPHASGEKKSVPSKTQQNGFASREDLRKSPILTNKRPLEKTSASDQSLLKKPKVSDASSALKAKQSVKAESDDDDDDHTPIAQRIKKPATAASGNKSSSSAKEKIKQVVSTKFKKTTKQSKKVMKTSKYSKSTRVPPGSGDGQKKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLAPEQEEVATMFAVMKDTDYMQKEKFRENFWNDWKKILGSKHLIQKLEYCDFTPIYDWYQQEKEKKKHMSKEEKNALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKGVPVPECPIPGEKWKEVRHDNTVTWLAFWNDPINQREFKYVFLAASSSLKGQSDKEKYEKARMLKDHIHKIRTAYTKNFTSKDASKRQIAVATYLIDKLALRAGNEKDDDEAETVGCCTLKVENVKAVSPNSLEFNFLGKDSIRYENTVEVELPVYKAILQFQAGKKPGDPLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRETKEGDVAEKVGVYNRANKEVAIICNHQRSISKSHAAQMEKLTEKINELKDNLKELKVDLERARKGKPPLKDAEGKRKKNLSPESIQKKITQIEAKIEKMERDKDTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVEPNFRF